SortingUtils.H

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/* Copyright 2019-2020 Andrew Myers, Maxence Thevenet, Remi Lehe
 * Weiqun Zhang
 *
 * This file is part of WarpX.
 *
 * License: BSD-3-Clause-LBNL
 */
#ifndef WARPX_PARTICLES_SORTING_SORTINGUTILS_H_
#define WARPX_PARTICLES_SORTING_SORTINGUTILS_H_
 
#include "Particles/WarpXParticleContainer.H"
 
#include <AMReX_Gpu.H>
#include <AMReX_Partition.H>
 
 
void fillWithConsecutiveIntegers( amrex::Gpu::DeviceVector<long>& v )
{
#ifdef AMREX_USE_GPU
    // On GPU: Use amrex
    auto data = v.data();
    auto N = v.size();
    AMREX_FOR_1D( N, i, {data[i] = i;});
#else
    // On CPU: Use std library
    std::iota( v.begin(), v.end(), 0L );
#endif
}
 
template< typename ForwardIterator >
ForwardIterator stablePartition(ForwardIterator const index_begin,
                                ForwardIterator const index_end,
                                amrex::Gpu::DeviceVector<int> const& predicate)
{
#ifdef AMREX_USE_GPU
    // On GPU: Use amrex
    int const* AMREX_RESTRICT predicate_ptr = predicate.dataPtr();
    int N = static_cast<int>(std::distance(index_begin, index_end));
    auto num_true = amrex::StablePartition(&(*index_begin), N,
        [predicate_ptr] AMREX_GPU_DEVICE (long i) { return predicate_ptr[i]; });
 
    ForwardIterator sep = index_begin;
    std::advance(sep, num_true);
#else
    // On CPU: Use std library
    ForwardIterator const sep = std::stable_partition(
        index_begin, index_end,
        [&predicate](long i) { return predicate[i]; }
    );
#endif
    return sep;
}
 
template< typename ForwardIterator >
int iteratorDistance(ForwardIterator const first,
                     ForwardIterator const last)
{
    return std::distance( first, last );
}
 
class fillBufferFlag
{
    public:
        fillBufferFlag( WarpXParIter const& pti, amrex::iMultiFab const* bmasks,
                        amrex::Gpu::DeviceVector<int>& inexflag,
                        amrex::Geometry const& geom ) {
 
            // Extract simple structure that can be used directly on the GPU
            m_particles = &(pti.GetArrayOfStructs()[0]);
            m_buffer_mask = (*bmasks)[pti].array();
            m_inexflag_ptr = inexflag.dataPtr();
            m_domain = geom.Domain();
            for (int idim=0; idim<AMREX_SPACEDIM; idim++) {
                m_prob_lo[idim] = geom.ProbLo(idim);
                m_inv_cell_size[idim] = geom.InvCellSize(idim);
            }
        }
 
 
        AMREX_GPU_HOST_DEVICE AMREX_FORCE_INLINE
        void operator()( const long i ) const {
            // Select a particle
            auto const& p = m_particles[i];
            // Find the index of the cell where this particle is located
            amrex::IntVect const iv = amrex::getParticleCell( p,
                                m_prob_lo, m_inv_cell_size, m_domain );
            // Find the value of the buffer flag in this cell and
            // store it at the corresponding particle position in the array `inexflag`
            m_inexflag_ptr[i] = m_buffer_mask(iv);
        }
 
    private:
        amrex::GpuArray<amrex::Real,AMREX_SPACEDIM> m_prob_lo;
        amrex::GpuArray<amrex::Real,AMREX_SPACEDIM> m_inv_cell_size;
        amrex::Box m_domain;
        int* m_inexflag_ptr;
        WarpXParticleContainer::ParticleType const* m_particles;
        amrex::Array4<int const> m_buffer_mask;
};
 
class fillBufferFlagRemainingParticles
{
    public:
        fillBufferFlagRemainingParticles(
                        WarpXParIter const& pti,
                        amrex::iMultiFab const* bmasks,
                        amrex::Gpu::DeviceVector<int>& inexflag,
                        amrex::Geometry const& geom,
                        amrex::Gpu::DeviceVector<long> const& particle_indices,
                        long const start_index ) :
                        m_start_index(start_index) {
 
            // Extract simple structure that can be used directly on the GPU
            m_particles = &(pti.GetArrayOfStructs()[0]);
            m_buffer_mask = (*bmasks)[pti].array();
            m_inexflag_ptr = inexflag.dataPtr();
            m_indices_ptr = particle_indices.dataPtr();
            m_domain = geom.Domain();
            for (int idim=0; idim<AMREX_SPACEDIM; idim++) {
                m_prob_lo[idim] = geom.ProbLo(idim);
                m_inv_cell_size[idim] = geom.InvCellSize(idim);
            }
        }
 
 
        AMREX_GPU_HOST_DEVICE AMREX_FORCE_INLINE
        void operator()( const long i ) const {
            // Select a particle
            auto const& p = m_particles[m_indices_ptr[i+m_start_index]];
            // Find the index of the cell where this particle is located
            amrex::IntVect const iv = amrex::getParticleCell( p,
                                m_prob_lo, m_inv_cell_size, m_domain );
            // Find the value of the buffer flag in this cell and
            // store it at the corresponding particle position in the array `inexflag`
            m_inexflag_ptr[m_indices_ptr[i+m_start_index]] = m_buffer_mask(iv);
        }
 
    private:
        amrex::GpuArray<amrex::Real,AMREX_SPACEDIM> m_prob_lo;
        amrex::GpuArray<amrex::Real,AMREX_SPACEDIM> m_inv_cell_size;
        amrex::Box m_domain;
        int* m_inexflag_ptr;
        WarpXParticleContainer::ParticleType const* m_particles;
        amrex::Array4<int const> m_buffer_mask;
        long const m_start_index;
        long const* m_indices_ptr;
};
 
template <typename T>
class copyAndReorder
{
    public:
        copyAndReorder(
            amrex::Gpu::DeviceVector<T> const& src,
            amrex::Gpu::DeviceVector<T>& dst,
            amrex::Gpu::DeviceVector<long> const& indices ) {
            // Extract simple structure that can be used directly on the GPU
            m_src_ptr = src.dataPtr();
            m_dst_ptr = dst.dataPtr();
            m_indices_ptr = indices.dataPtr();
        }
 
        AMREX_GPU_DEVICE AMREX_FORCE_INLINE
        void operator()( const long ip ) const {
            m_dst_ptr[ip] = m_src_ptr[ m_indices_ptr[ip] ];
        }
 
    private:
        T const* m_src_ptr;
        T* m_dst_ptr;
        long const* m_indices_ptr;
};
 
#endif // WARPX_PARTICLES_SORTING_SORTINGUTILS_H_